DEFAZIO, GIUSEPPE
DEFAZIO, GIUSEPPE
DIPARTIMENTO DI BIOSCIENZE , BIOTECNOLOGIE E AMBIENTE
An innovative nuclear antigen-based approach for single-cell isolation of circulating tumor cells in adrenal cortical carcinoma
2025-01-01 Cantini, Giulia; Salvianti, Francesca; Armignacco, Roberta; Propato, Arianna Pia; Canu, Letizia; Ercolino, Tonino; Dedonno, Anna Aurora; Lepri, Chiara; Mannelli, Massimo; Nesi, Gabriella; Pillozzi, Serena; Defazio, Giuseppe; Pinzani, Pamela; Luconi, Michaela
Benchmarking short- and long-read sequencing technologies for metagenomic profiling of microbiomes
2026-01-01 Visci, Grazia; Notario, Elisabetta; Defazio, Giuseppe; Caratozzolo, Mariano Francesco; Cox, Sharon Natasha; Fosso, Bruno; Marzano, Marinella; Pesole, Graziano
Capitolo 21 - Le analisi di sequenziamento per lo studio del microbiota.
2023-01-01 Defazio, Giuseppe; Fosso, Bruno; Piancone, Elisabetta; Pesole, Graziano
Exome sequencing data management and variant filtering in azoospermic and testicular germ cell tumor patients
2023-01-01 Defazio, Giuseppe; Farnetani, Ginevra; Riera, Antoni; Csilla Gabriella, Krausz
Galaxy for accessible, reproducible, and collaborative data analyses: 2026 update
2026-01-01 Afgan, Enis; Amoukou, Najat; Buono Rafael, Andrade; Anton, Mihail; Antoniewski, Christophe; Austin, Patrick; Awan Ahmed, Hamid; Backofen, Rolf; Bacon Wendi, Anne; Baker, Dannon; Barreau, Arthur; Batut, Bérénice; Bernt, Matthias; Blankenberg, Daniel; Bretaudeau, Anthony; Bromhead Catherine, Joan; Burhans, Richard; Burke, Melissa; Cain, Scott; Callan, Danielle; Cech, Martin; Chavero-Díez, María; Chei, Haswane; Chen, Ying; Chiang, Diana; Chilton John, M; Collins Tyler, James; Coppens, Frederik; Coraor, Nate; Coulombe, Charles; Crusoe Michael, R; Cumbo, Fabio; Cumunel, Triskell; D'Silva, Michael; Dadras, Armin; Dalle, Céline; Dang, Khai; Davis John, Y; De Geest, Paul; De Koning, Willem; Defazio, Giuseppe; Depoortere, Boris; Do, Katherine; Domínguez Begines José, Manuel; Droesbeke, Bert; Duarte Erick, Nicolas; Fernández-del-Castillo, Enol; Fix, Jeremy; Formenti, Giulio; Frey, Julian; Föll Melanie, Christine; Gauthier, Carol; Gerberding, Kilian; Giacomoni, Franck; Goecks, Jeremy; Goonasekera Nuwan, A; Goué, Nadia; Griffin Timothy, J; Grüning Björn, Andreas; Guerler, Aysam; Guitton, Yann; Gustafsson Ove Johan, Ragnar; Gömöryová, Kristína; Harakalova, Magdalena; Hecht, Helge; Heidari, Alireza; Heyl, Florian; Hillman-Jackson, Jennifer; Hiltemann, Saskia; Ansari Mina, Hojat; Hotz, Hans-Rudolf; Hyde Cameron, John; Jacques, Pierre-Étienne; Jagtap Pratik, Dilip; Joshi, Jayadev; Jossé, Marie; Jumah Khaled Moahmmad, Ahmad; Elyaderani Arash, Kadkhodaei; Kamieniecka, Katarzyna; Kattenborn, Teja; Konkol, Markus; Kostrykin, Leonid; Kucher, Natalie; Kumar, Anup; Kuntz, Mira; Langhorst Bradley, William; Lariviere, Delphine; Le Bras, Yvan; Le Corguillé, Gildas; Le Cras, Jean; Lee, Justin; Leendertse, Jan; Lefeuvre, Hugo; Leskošek, Brane; Liborio Leandro, Miguel; Libouban, Romane; Loach, Marisa; Tabernero Jose David, Lopez; Lopez-Delisle, Lucille; Lusk, Daniel; Mahmoud, Alexandru; Mahé, Molène; Maier, Wolfgang; Makunin, Igor; Mccaffrey, Kirsty; Medico Jack, A; Mehta, Subina; Mei, Hailiang; Minkova, Mirela; Momin, Saim; Junior Paulo Cilas Morais, Lyra; Müller, Teresa; Nilchi Amirhossein, Naghsh; Nandi, Tannistha; Nasr Engy Mohamed, Taha; Nekrutenko, Anton; Nelson, Tiffanie; Nussbaum, Johannes; Oba Asime, James; Opioła, Łukasz; Payet, Kevin; Petera, Melanie; Polunina Polina, V; Pond, Sergei; Poterlowicz, Krzysztof; Price Gareth, Robert; Qiu, Junhao; Rasche, Helena; Raubenolt, Bryan; Reynolds Tristan, N; Rogers, Dave; Rohr, Karl; Saudade Gabriel, Ferreira; Savage Michelle, Terese; Savchenko, Volodymyr; Schatz Michael, C; Schmitz, Isabelle; Schneider, Daniela; Seguineau, Pauline; Serrano-Solano, Beatriz; Siguret, Clea; Smeds, Patrik; Sollitto, Marco; Soranzo, Nicola; Srikakulam Sanjay, Kumar; Sterck, Lieven; Strepis, Nikolaos; Stubbs, Andrew; Suderman, Keith; Syme, Anna; Tangaro, Marco Antonio; Koopaei Reyhaneh, Tavakoli; Tedds Jonathan, Andrew; Tekman, Mehmet; Thang Wai Cheng, (Mike); Thanki Anil, S; Uhl, Michael; Vajna-Jehle, Janusch; Van Den Beek, Marius; Varshney, Deepti; Vazov Nikolay, Alexandrov; Vessio, Jennifer; Videm, Pavankumar; Vondrak, Tomas; Wagner, Reid; Watson Gregory, R; Weber Ralf, J M; Whitaker-Allen, Natalie; Zambelli, Federico; Zierep, Paul; Zoabi, Rand
Genetic determinants of testicular sperm extraction outcomes: insights from a large multicentre study of men with non-obstructive azoospermia
2025-01-01 Riera-Escamilla, Antoni; Arafa, Mohamed M; Farnetani, Ginevra; Xavier, Miguel J; Oud, Manon S; Majzoub, Ahmad A; Ramos, Liliana; Abrardo, Chiara; Spinelli, Matilde; Moreno-Mendoza, Daniel; Defazio, Giuseppe; Ars, Elisabet; Pybus, Marc; Sánchez Curbelo, Josvany R; Elbardisi, Haitham T; Nawaz, Shoaib; Syed, Najeeb; Ruiz-Castané, Eduard; Van Der Heijden, Godfried W; Fakhro, Khalid A; Veltman, Joris A; Krausz, Csilla
ITSoneDB & ITSoneWB: supporting the metabarcoding investigation of eukaryotic communities
2019-01-01 Santamaria, Monica; Pesole, Graziano; Fosso, Bruno; Tangaro, MARCO ANTONIO; Flavio Licciulli, Vito; Grillo, Giorgio; Defazio, Giuseppe
ITSoneDB: a reliable resource for the investigation of the human mycobiome
2019-01-01 Defazio, Giuseppe; Fosso, Bruno; Santamaria, Monica; Pesole, Graziano
ITSoneWB: Profiling global taxonomic diversity of eukaryotic communities on Galaxy
2021-01-01 Tangaro, M; Defazio, G; Fosso, B; Licciulli, Vf; Grillo, G; Donvito, G; Lavezzo, E; Baruzzo, G; Pesole, G; Santamaria, M.
kMetaShot: a fast and reliable taxonomy classifier for metagenome-assembled genomes
2025-01-01 Defazio, Giuseppe; Tangaro, Marco Antonio; Pesole, Graziano; Fosso, Bruno
Machine learning-based assessment of the healthy human gut mycobiota landscape using ITS1 DNA metabarcoding data
2026-01-01 Defazio, Giuseppe; Lorusso, Erika; De Robertis, Mariangela; Mello, Tommaso; Galli, Andrea; Pesole, Graziano; Fosso, Bruno
Natural and after colon washing fecal samples: the two sides of the coin for investigating the human gut microbiome
2022-01-01 Piancone, Elisabetta; Fosso, Bruno; Marzano, Marinella; De Robertis, Mariangela; Notario, Elisabetta; Oranger, Annarita; Manzari, Caterina; Bruno, Silvia; Visci, Grazia; Defazio, Giuseppe; D’Erchia, Anna Maria; Filomena, Ermes; Maio, Dominga; Minelli, Martina; Vergallo, Ilaria; Minelli, Mauro; Pesole, Graziano
RUVBL1 correlates with chaperones expression in HCC and its activity is required for HSF1-mediated stress response
2024-01-01 Mello, T.; Guida, A.; Simeone, I.; Papini, D.; Vannucci, F.; Defazio, G.; Polvani, S.; Ceni, E.; Dragoni, G.; Innocenti, T.; Picariello, L.; Galli, A.
Stem cell impairment at the host–microbiota interface in colorectal cancer
2021-01-01 Marzano, M.; Fosso, B.; Piancone, E.; Defazio, G.; Pesole, G.; De Robertis, M.
Transcriptomic analysis on pancreatic adenocarcinoma patients uncovers KRAS-mediated PPAR pathway alteration
2025-01-01 Defazio, Giuseppe; Scolari, Federico; Fancelli, Sara; Polvani, Simone; Lavacchi, Daniele; Picariello, Lucia; Tubita, Alessandro; Luconi, Michaela; Antonuzzo, Lorenzo; Galli, Andrea; Pillozzi, Serena
Treatment with antidepressant drugs and hyponatremia: a network meta-analysis
2025-01-01 Norello, Dario; Defazio, Giuseppe; Corona, Giovanni; Caiulo, Chiara; Maggi, Mario; Peri, Alessandro
| Titolo | Data di pubblicazione | Autore(i) | File |
|---|---|---|---|
| An innovative nuclear antigen-based approach for single-cell isolation of circulating tumor cells in adrenal cortical carcinoma | 1-gen-2025 | Cantini, Giulia; Salvianti, Francesca; Armignacco, Roberta; Propato, Arianna Pia; Canu, Letizia; Ercolino, Tonino; Dedonno, Anna Aurora; Lepri, Chiara; Mannelli, Massimo; Nesi, Gabriella; Pillozzi, Serena; Defazio, Giuseppe; Pinzani, Pamela; Luconi, Michaela | |
| Benchmarking short- and long-read sequencing technologies for metagenomic profiling of microbiomes | 1-gen-2026 | Visci, Grazia; Notario, Elisabetta; Defazio, Giuseppe; Caratozzolo, Mariano Francesco; Cox, Sharon Natasha; Fosso, Bruno; Marzano, Marinella; Pesole, Graziano | |
| Capitolo 21 - Le analisi di sequenziamento per lo studio del microbiota. | 1-gen-2023 | Defazio, Giuseppe; Fosso, Bruno; Piancone, Elisabetta; Pesole, Graziano | |
| Exome sequencing data management and variant filtering in azoospermic and testicular germ cell tumor patients | 1-gen-2023 | Defazio, Giuseppe; Farnetani, Ginevra; Riera, Antoni; Csilla Gabriella, Krausz | |
| Galaxy for accessible, reproducible, and collaborative data analyses: 2026 update | 1-gen-2026 | Afgan, Enis; Amoukou, Najat; Buono Rafael, Andrade; Anton, Mihail; Antoniewski, Christophe; Austin, Patrick; Awan Ahmed, Hamid; Backofen, Rolf; Bacon Wendi, Anne; Baker, Dannon; Barreau, Arthur; Batut, Bérénice; Bernt, Matthias; Blankenberg, Daniel; Bretaudeau, Anthony; Bromhead Catherine, Joan; Burhans, Richard; Burke, Melissa; Cain, Scott; Callan, Danielle; Cech, Martin; Chavero-Díez, María; Chei, Haswane; Chen, Ying; Chiang, Diana; Chilton John, M; Collins Tyler, James; Coppens, Frederik; Coraor, Nate; Coulombe, Charles; Crusoe Michael, R; Cumbo, Fabio; Cumunel, Triskell; D'Silva, Michael; Dadras, Armin; Dalle, Céline; Dang, Khai; Davis John, Y; De Geest, Paul; De Koning, Willem; Defazio, Giuseppe; Depoortere, Boris; Do, Katherine; Domínguez Begines José, Manuel; Droesbeke, Bert; Duarte Erick, Nicolas; Fernández-del-Castillo, Enol; Fix, Jeremy; Formenti, Giulio; Frey, Julian; Föll Melanie, Christine; Gauthier, Carol; Gerberding, Kilian; Giacomoni, Franck; Goecks, Jeremy; Goonasekera Nuwan, A; Goué, Nadia; Griffin Timothy, J; Grüning Björn, Andreas; Guerler, Aysam; Guitton, Yann; Gustafsson Ove Johan, Ragnar; Gömöryová, Kristína; Harakalova, Magdalena; Hecht, Helge; Heidari, Alireza; Heyl, Florian; Hillman-Jackson, Jennifer; Hiltemann, Saskia; Ansari Mina, Hojat; Hotz, Hans-Rudolf; Hyde Cameron, John; Jacques, Pierre-Étienne; Jagtap Pratik, Dilip; Joshi, Jayadev; Jossé, Marie; Jumah Khaled Moahmmad, Ahmad; Elyaderani Arash, Kadkhodaei; Kamieniecka, Katarzyna; Kattenborn, Teja; Konkol, Markus; Kostrykin, Leonid; Kucher, Natalie; Kumar, Anup; Kuntz, Mira; Langhorst Bradley, William; Lariviere, Delphine; Le Bras, Yvan; Le Corguillé, Gildas; Le Cras, Jean; Lee, Justin; Leendertse, Jan; Lefeuvre, Hugo; Leskošek, Brane; Liborio Leandro, Miguel; Libouban, Romane; Loach, Marisa; Tabernero Jose David, Lopez; Lopez-Delisle, Lucille; Lusk, Daniel; Mahmoud, Alexandru; Mahé, Molène; Maier, Wolfgang; Makunin, Igor; Mccaffrey, Kirsty; Medico Jack, A; Mehta, Subina; Mei, Hailiang; Minkova, Mirela; Momin, Saim; Junior Paulo Cilas Morais, Lyra; Müller, Teresa; Nilchi Amirhossein, Naghsh; Nandi, Tannistha; Nasr Engy Mohamed, Taha; Nekrutenko, Anton; Nelson, Tiffanie; Nussbaum, Johannes; Oba Asime, James; Opioła, Łukasz; Payet, Kevin; Petera, Melanie; Polunina Polina, V; Pond, Sergei; Poterlowicz, Krzysztof; Price Gareth, Robert; Qiu, Junhao; Rasche, Helena; Raubenolt, Bryan; Reynolds Tristan, N; Rogers, Dave; Rohr, Karl; Saudade Gabriel, Ferreira; Savage Michelle, Terese; Savchenko, Volodymyr; Schatz Michael, C; Schmitz, Isabelle; Schneider, Daniela; Seguineau, Pauline; Serrano-Solano, Beatriz; Siguret, Clea; Smeds, Patrik; Sollitto, Marco; Soranzo, Nicola; Srikakulam Sanjay, Kumar; Sterck, Lieven; Strepis, Nikolaos; Stubbs, Andrew; Suderman, Keith; Syme, Anna; Tangaro, Marco Antonio; Koopaei Reyhaneh, Tavakoli; Tedds Jonathan, Andrew; Tekman, Mehmet; Thang Wai Cheng, (Mike); Thanki Anil, S; Uhl, Michael; Vajna-Jehle, Janusch; Van Den Beek, Marius; Varshney, Deepti; Vazov Nikolay, Alexandrov; Vessio, Jennifer; Videm, Pavankumar; Vondrak, Tomas; Wagner, Reid; Watson Gregory, R; Weber Ralf, J M; Whitaker-Allen, Natalie; Zambelli, Federico; Zierep, Paul; Zoabi, Rand | |
| Genetic determinants of testicular sperm extraction outcomes: insights from a large multicentre study of men with non-obstructive azoospermia | 1-gen-2025 | Riera-Escamilla, Antoni; Arafa, Mohamed M; Farnetani, Ginevra; Xavier, Miguel J; Oud, Manon S; Majzoub, Ahmad A; Ramos, Liliana; Abrardo, Chiara; Spinelli, Matilde; Moreno-Mendoza, Daniel; Defazio, Giuseppe; Ars, Elisabet; Pybus, Marc; Sánchez Curbelo, Josvany R; Elbardisi, Haitham T; Nawaz, Shoaib; Syed, Najeeb; Ruiz-Castané, Eduard; Van Der Heijden, Godfried W; Fakhro, Khalid A; Veltman, Joris A; Krausz, Csilla | |
| ITSoneDB & ITSoneWB: supporting the metabarcoding investigation of eukaryotic communities | 1-gen-2019 | Santamaria, Monica; Pesole, Graziano; Fosso, Bruno; Tangaro, MARCO ANTONIO; Flavio Licciulli, Vito; Grillo, Giorgio; Defazio, Giuseppe | |
| ITSoneDB: a reliable resource for the investigation of the human mycobiome | 1-gen-2019 | Defazio, Giuseppe; Fosso, Bruno; Santamaria, Monica; Pesole, Graziano | |
| ITSoneWB: Profiling global taxonomic diversity of eukaryotic communities on Galaxy | 1-gen-2021 | Tangaro, M; Defazio, G; Fosso, B; Licciulli, Vf; Grillo, G; Donvito, G; Lavezzo, E; Baruzzo, G; Pesole, G; Santamaria, M. | |
| kMetaShot: a fast and reliable taxonomy classifier for metagenome-assembled genomes | 1-gen-2025 | Defazio, Giuseppe; Tangaro, Marco Antonio; Pesole, Graziano; Fosso, Bruno | |
| Machine learning-based assessment of the healthy human gut mycobiota landscape using ITS1 DNA metabarcoding data | 1-gen-2026 | Defazio, Giuseppe; Lorusso, Erika; De Robertis, Mariangela; Mello, Tommaso; Galli, Andrea; Pesole, Graziano; Fosso, Bruno | |
| Natural and after colon washing fecal samples: the two sides of the coin for investigating the human gut microbiome | 1-gen-2022 | Piancone, Elisabetta; Fosso, Bruno; Marzano, Marinella; De Robertis, Mariangela; Notario, Elisabetta; Oranger, Annarita; Manzari, Caterina; Bruno, Silvia; Visci, Grazia; Defazio, Giuseppe; D’Erchia, Anna Maria; Filomena, Ermes; Maio, Dominga; Minelli, Martina; Vergallo, Ilaria; Minelli, Mauro; Pesole, Graziano | |
| RUVBL1 correlates with chaperones expression in HCC and its activity is required for HSF1-mediated stress response | 1-gen-2024 | Mello, T.; Guida, A.; Simeone, I.; Papini, D.; Vannucci, F.; Defazio, G.; Polvani, S.; Ceni, E.; Dragoni, G.; Innocenti, T.; Picariello, L.; Galli, A. | |
| Stem cell impairment at the host–microbiota interface in colorectal cancer | 1-gen-2021 | Marzano, M.; Fosso, B.; Piancone, E.; Defazio, G.; Pesole, G.; De Robertis, M. | |
| Transcriptomic analysis on pancreatic adenocarcinoma patients uncovers KRAS-mediated PPAR pathway alteration | 1-gen-2025 | Defazio, Giuseppe; Scolari, Federico; Fancelli, Sara; Polvani, Simone; Lavacchi, Daniele; Picariello, Lucia; Tubita, Alessandro; Luconi, Michaela; Antonuzzo, Lorenzo; Galli, Andrea; Pillozzi, Serena | |
| Treatment with antidepressant drugs and hyponatremia: a network meta-analysis | 1-gen-2025 | Norello, Dario; Defazio, Giuseppe; Corona, Giovanni; Caiulo, Chiara; Maggi, Mario; Peri, Alessandro |